Volume 107, Issue 4
Article

Development of a System for Postmarketing Population Pharmacokinetic and Pharmacodynamic Studies Using Real‐World Data From Electronic Health Records

Leena Choi

Corresponding Author

E-mail address: leena.choi@vumc.org

Department of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

Correspondence: Leena Choi (E-mail address: leena.choi@vumc.org)

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Cole Beck

Department of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Elizabeth McNeer

Department of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Hannah L. Weeks

Department of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Michael L. Williams

Department of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Nathan T. James

Department of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Xinnan Niu

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Bassel W. Abou‐Khalil

Department of Neurology, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Kelly A. Birdwell

Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Dan M. Roden

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA

Department of Pharmacology, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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C. Michael Stein

Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA

Department of Pharmacology, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Cosmin A. Bejan

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Joshua C. Denny

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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Sara L. Van Driest

Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA

Department of Pediatrics, Vanderbilt University Medical Center, Nashville, Tennessee, USA

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First published: 20 January 2020
Citations: 2

Abstract

Postmarketing population pharmacokinetic (PK) and pharmacodynamic (PD) studies can be useful to capture patient characteristics affecting PK or PD in real‐world settings. These studies require longitudinally measured dose, outcomes, and covariates in large numbers of patients; however, prospective data collection is cost‐prohibitive. Electronic health records (EHRs) can be an excellent source for such data, but there are challenges, including accurate ascertainment of drug dose. We developed a standardized system to prepare datasets from EHRs for population PK/PD studies. Our system handles a variety of tasks involving data extraction from clinical text using a natural language processing algorithm, data processing, and data building. Applying this system, we performed a fentanyl population PK analysis, resulting in comparable parameter estimates to a prior study. This new system makes the EHR data extraction and preparation process more efficient and accurate and provides a powerful tool to facilitate postmarketing population PK/PD studies using information available in EHRs.

Number of times cited according to CrossRef: 2

  • Data Science in Clinical Pharmacology and Drug Development for Improving Health Outcomes in Patients, Clinical Pharmacology & Therapeutics, 10.1002/cpt.1803, 107, 4, (683-686), (2020).
  • Medication Management in Frail Older People: Consensus Principles for Clinical Practice, Research, and Education, Journal of the American Medical Directors Association, 10.1016/j.jamda.2020.05.004, (2020).